Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820785.1_cds_XP_016500541.1_14358
CDS Infomation

[gene=LOC107818976] [db_xref=GeneID:107818976] [protein=protein NEN1-like] [protein_id=XP_016500541.1] [location=complement(join(118250..118481,118915..119546,120862..120925,121410..121456,122278..122435,122552..122831))] [gbkey=CDS]
Sequence

ATGATAATGGGCGATGAGAGGATTGAGGTAGCTTTCTTCGATGTTGAGACAACTGTACCG
ACCCGACCCGGACAAGGATTCGCAATCCTAGAGTTTGGGGCTATTCTTGTTTGTCCAAGG
AAACTCGTCGAGCAGGAGAGTTACTCCTCCCTAGTACGGCCCACTGATCTGGCCCTCATT
TCCACACTCTCTGTTCGCTGTAACGGTATTACCCCAGAAGCAGTCACAAACGCCCCCACC
TTTGGTGAAATCGCTGACAAAGTCTATGACATTCTCCATGGGAGAATATGGGCGGGCCAC
AATATAGTGAAATTTGATTGTCATCGGATTCGGGAAGCATTTGCTGGGATTGATAGGGCA
GCACCAGAGCCTAAGGGAATAATTGATACATTGTCCTTATTGACTCAGAGATTTGGAAGG
AGAGCTGGTGACATGAAGATGGCCTCACTTGCTAGTTATTTTGGCCTTGGACAGCAAACA
CATCGGAGTTTGGATGATGTCCGAATGAATCTTGAAGTGCTGAAGTATTGTGCAACTGTC
TTGTTTCTGGAATCCAGCCTGCCAGACATATTTACAGAGAACAGTTGGGTGTCTCCTAAT
GCTACTACAAGAAGCCGTGCTAATGGGAGAGCTTCTCCAGGGGAGACGGGCTTCAGTGCA
GATAGACCCTCATCAAGTGTCAAGATAGAAACTTATGTGGAGAGGATGGCAGAAATCAAC
CCTTTTAACATGGCCAGAGTGGAAGAGTCCCTTCTATCAGATGACATGGAAGATGAATCT
GGTTCATATTCTCCAGGATCTTCCACAACTGCAACTGAGAGTTTCATTGGCTGCCCTGAC
TTCTTAGAACCAAATGAAATCTCAATACCTTCGGTCTCTGTAAGTCTTGCCCCTTTTTGT
CGTGGGTCTCAGAAGATACAGGTATTGCACGACTATGGTGAACTACAAATTTGCTGTAGA
CGAATGAAGGTGCGGTTTGGTGTTAGTTCAAAGTATGCTGATTATGCTGGTCGGAGACGA
TTGAGTTTTGTGGTTGATGCATCATCAGACCTGTGCCAAATCCTGGATGCAGTTGATAAT
CTTGCTCAAAAACTATCTGTCGACTCAGGTAGCAGCTCAGAGTGGAGGCCTGTGGTAACT
AGAAAACCTGGCTTTATGAACTATCCTACTGTCCGATTAAATTTACCAACTGTTATAGAT
GGTAACAATTCCCGCTGGATCACAGAGATTTACCAGAAAGAATCTTCTACAACACAAAAG
CTCGTCTTTAGTAAATTCGATGTGACAGAACTGGAGTCCTTGATAACACCAGGAACATTT
GTGGATGCTTACTTCTCTGTGGATTCATATGACATCCAACAGAATGCTGGCATCCGTTTA
GTCGCAGAAAAGTTGATCCTGCACTCCACCTAA

Peptide Sequence

PEP ID

XP_016500541.1
PEP Infomation

PREDICTED: protein NEN1-like [Nicotiana tabacum]
Sequence

MIMGDERIEVAFFDVETTVPTRPGQGFAILEFGAILVCPRKLVEQESYSSLVRPTDLALI
STLSVRCNGITPEAVTNAPTFGEIADKVYDILHGRIWAGHNIVKFDCHRIREAFAGIDRA
APEPKGIIDTLSLLTQRFGRRAGDMKMASLASYFGLGQQTHRSLDDVRMNLEVLKYCATV
LFLESSLPDIFTENSWVSPNATTRSRANGRASPGETGFSADRPSSSVKIETYVERMAEIN
PFNMARVEESLLSDDMEDESGSYSPGSSTTATESFIGCPDFLEPNEISIPSVSVSLAPFC
RGSQKIQVLHDYGELQICCRRMKVRFGVSSKYADYAGRRRLSFVVDASSDLCQILDAVDN
LAQKLSVDSGSSSEWRPVVTRKPGFMNYPTVRLNLPTVIDGNNSRWITEIYQKESSTTQK
LVFSKFDVTELESLITPGTFVDAYFSVDSYDIQQNAGIRLVAEKLILHST

Transcript Sequence

Gene sequence data has not been registered.